教員情報 - 蒔田　由布子

マキタ　ユウコ Makita Yuko
蒔田　由布子

所属前橋工科大学工学部生命情報学科

前橋工科大学大学院工学研究科生命情報学専攻（修士課程）

前橋工科大学大学院工学研究科環境・生命工学専攻（博士課程）

前橋工科大学工学部情報・生命工学群

職種教授

著書・論文歴
2024/01/15	論文	Arabidopsis transcriptomic analysis reveals cesium inhibition of root growth involves abscisic acid signaling Planta 259 (2),36 (共著)
2023/01/20	論文	Translational activation of ribosome-related genes at initial photoreception is dependent on signals derived from both the nucleus and the chloroplasts in Arabidopsis thaliana Journal of Plant Research 136,227-238頁 (共著)
2022/12/20	論文	Intergenic splicing-stimulated transcriptional readthrough is suppressed by nonsense-mediated mRNA decay in Arabidopsis Communications Biology (共著)
2022/05/05	論文	A collection of inducible transcription factor-GR fusion lines for functional analyses in Arabidopsis thaliana Plant Journal (共著)
2022/04/28	論文	Sequence-based evaluation of promoter context for prediction of transcription start sites in Arabidopsis and rice Scientific Reports 12 (6976),1-12頁 (共著)
2022/03/18	論文	Tracking metabolites at single-cell resolution reveals metabolic dynamics during plant mitosis Plant Physiology (共著)
2021/12/01	論文	Identification of a dual orange/far-red and blue light photoreceptor from an oceanic green picoplankton Nature Communications 12 (1),3593-3593頁 (共著)
2020/05/26	論文	Regulatory Potential of bHLH-Type Transcription Factors on the Road to Rubber Biosynthesis in Hevea brasiliensis. Plants (Basel, Switzerland) 9 (6) (共著)
2020/03/14	論文	Time-Course Transcriptome Study Reveals Mode of bZIP Transcription Factors on Light Exposure in Arabidopsis. International journal of molecular sciences 21 (6) (共著)
2020/03/01	論文	Translational Landscape of Protein-Coding and Non-Protein-Coding RNAs upon Light Exposure in Arabidopsis. Plant & cell physiology 61 (3),536-545頁 (共著)
2018/07/24	論文	Transcripts from downstream alternative transcription start sites evade uORF-mediated inhibition of gene expression in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 115 (30),7831-7836頁 (共著)
2018/05/28	論文	Screening of fungi for decomposition of lignin-derived products from Japanese cedar Journal of Bioscience and Bioengineering 126 (5),573-579頁 (共著)
2018/05/01	論文	Identifying the target genes of SUPPRESSOR OF GAMMA RESPONSE 1, a master transcription factor controlling DNA damage response in Arabidopsis. The Plant journal : for cell and molecular biology 94 (3),439-453頁 (共著)
2018/01/19	論文	Construction of Pará rubber tree genome and multi-transcriptome database accelerates rubber researches BMC Genomics 19 (Suppl 1),922 (共著)
2017/04/01	論文	Large-scale collection of full-length cDNA and transcriptome analysis in Hevea brasiliensis DNA Research 24 (2),159-167頁 (共著)
2017/01/01	論文	Chemical-Induced Inhibition of Blue Light-Mediated Seedling Development Caused by Disruption of Upstream Signal Transduction Involving Cryptochromes in Arabidopsis thaliana PLANT AND CELL PHYSIOLOGY 58 (1),95-105頁 (共著)
2016/06/01	論文	The rubber tree genome shows expansion of gene family associated with rubber biosynthesis SCIENTIFIC REPORTS 6,28594 (共著)
2015/12/01	論文	Functional and expression analyses of transcripts based on full-length cDNAs of Sorghum bicolor DNA RESEARCH 22 (6),485-493頁 (共著)
2015/01/01	論文	MOROKOSHI: Transcriptome Database in Sorghum bicolor PLANT AND CELL PHYSIOLOGY 56 (1),e6 (共著)
2014/12/01	論文	Next-Generation Sequencing of Genomic DNA Fragments Bound to a Transcription Factor in Vitro Reveals Its Regulatory Potential Genes 5 (4),1115-1131頁 (共著)
2014/03/01	論文	Database Construction for PromoterCAD: Synthetic Promoter Design for Mammals and Plants ACS SYNTHETIC BIOLOGY 3 (3),192-196頁 (共著)
2013/07/01	論文	PosMed: Ranking genes and bioresources based on Semantic Web Association Study. Nucleic acids research 41 (Web Server issue),W109-14頁 (共著)
2013/07/01	論文	PromoterCAD: data-driven design of plant regulatory DNA Nucleic acids research 41 (W1),W569-W574頁 (共著)
2011/01/01	論文	The RIKEN integrated database of mammals Nucleic acids research 39 (Database issue),D861-D870頁 (共著)
2009/12/01	論文	Automated genome design in higher plants and bacterial pathway introduction towards green innovation GENES & GENETIC SYSTEMS 84 (6),498 (共著)
2009/07/01	論文	OmicBrowse: a Flash-based high-performance graphics interface for genomic resources Nucleic acids research 37 (Web Server issue),W57-W62頁 (共著)
2009/07/01	論文	PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning Nucleic acids research 37 (Web Server issue),W147-W152頁 (共著)
2009/07/01	論文	PosMed-plus: An Intelligent Search Engine that Inferentially Integrates Cross-Species Information Resources for Molecular Breeding of Plants PLANT AND CELL PHYSIOLOGY 50 (7),1249-1259頁 (共著)
2008/01/01	論文	DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information Nucleic acids research 36 (Database issue),D93-D96頁 (共著)
2007/07/01	論文	Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions Nucleic acids research 35 (Web Server issue),W227-W231頁 (共著)
2007/04/01	論文	A tale of two oxidation states: Bacterial colonization of arsenic-rich environments PLOS GENETICS 3 (4),e53 (共著)
2007/02/01	論文	Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes BMC BIOINFORMATICS 8,47 (共著)
2005/08/01	論文	Prediction of transcriptional terminators in Bacillus subtilis and related species PLOS COMPUTATIONAL BIOLOGY 1 (3),212-221頁 (共著)
2005/01/06	論文	Bayesian joint prediction of associated transcription factors in Bacillus subtilis PACIFIC SYMPOSIUM ON BIOCOMPUTING 2005,507-518頁 (共著)
2004/08/01	論文	Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data BIOINFORMATICS 20,101-108頁 (共著)
2004/01/01	論文	DBTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics Nucleic acids research 32 (Database issue),D75-D77頁 (共著)