Faculty introduction - 黒田　誠 |

黒田　誠

Department / Course Faculty of Health Science Department of Medical Technology

Graduate School of Health Sciences Division of Health Sciences

Job Professor

Selected Presentations
	A unique genome feature of an amoebal endosymbiotic primitive chlamydia, Neochlamydia, showing intimate mutualistic interaction with Acanthamoeba. (113th ASM general meeting.)
	An Alkaline Shock Protein and its Regulation in Staphylococcus aureus. (The 95th General Meeting of American Society for Microbiology,)
	An Alkaline Shock Protein and its Regulation in Staphylococcus aureus. (Stress Response and Molecular Chaperones, The 10th Rinshoken International Conference)
	Antimicrobial Susceptibility Profiles and PFGE Typing of Campylobacter jejuni Isolated from Various Sources in Japan. (the 16th International Workshop on Campylobacter, Helicobacter, and Related Organisms.)
	Characteristic SNPs in Mycobacterium leprae isolated in Japan. (The 18th International Leprosy Congress.)
	Department of Bacteriology, Juntendo University, Tokyo　National Institute of Technology and Evaluation, Sendai, (Comparative genomics and evolution of Staphylococcus aureus, epidermidis and haemolyticus Genomes 2004)
	Expression profiles of KSHV-encoded miRNAs in KSHV-associated diseases. (2012 International Congress on Oncogenic Herpesviruses and Associated Diseases.)
	Identification of the Up- and Down-Regulated Genes in Vancomycin-Resistant Staphylococcus aureus Starins Mu3 and Mu50 by cDNA differential Hybridization Method (The 9th International Symposium on Staphylococci and Staphylococcal Infections)
	Is1-mediated Horizontal Acquisition Of Multiple Antibiotics Resistance In Salmonella enterica Serovar Typhimurium.
	Longitudinal analysis of gut flora in Kawasaki disease patients using next generation DNA sequencing The 10th International Kawasaki Disease Symposium (第10回国際川崎病シンポジウム)
	Overexpression of sarA gene affects beta-lactam and glycopeptide susceptibility. (Gordon Research Conference on Staphylococcal Disease)
	Regulation of heat and metal responsible czr operon in Staphylococcus aureus. (International conference on dynamics and regulation of the stress response)
	The 10th International Kawasaki Disease Symposium (第10回国際川崎病シンポジウム)
	VraSR Two-component System Modulates the Expression of the Genes in Cell-Wall Biosynthesis Pathway Including Penicillin-Binding Protein 2 PBP2 and Monofunctional Glycosyltransferase SgtB of Staphylococcus aureus. (The 6th Japan-Korea International Symposium on Microbiology)
	VraSR Two-component System Modulates the Expression of the Genes in Cell-Wall Biosynthesis Pathway IncludingPenicillin-Binding Protein 2 PBP2 and Monofunctional Glycosyltransferase SgtB of Staphylococcus aureus. (The 10th International Symposium on Staphylococci and Staphylococcal Infections)
2022/09	Effectiveness of Enhanced Active Case Finding and Self-isolation in the Early Phase of SARS-CoV-2 B.1.1.529 (Omicron) (variant Transmission - Osaka, Japan, December 2021-January 2022. 11th Global Scientific Conference)
2019/09	CHARACTERIZATION OF THE CYTOTOXICITY BY STREPTOCOCCUS INTERMEDIUS TYPE SEVEN SECRETION SYSTEM. (MICROBIAL PATHOGENESIS & HOST RESPONSE)
2019/08	Genome-wide CRISPR screens identify novel glycan regulators. (25th International Symposium on Glycoconjugates)
2018/10	A prolonged multispecies outbreak of carbapenemase-producing Enterobacteriaceae due to transmissible plasmid with carbapenemase gene. (ID week 2018)
2018/09	Complete genome sequence of a blaKPC-2-positive Klebsiella pneumoniae strain isolated from the effluent of an urban sewage treatment plant in Japan. (ESCMID/ASM Conference on Drug Development to Meet the Challenge of Antimicrobial Resistance)
2018/09	Growth Inhibition of Streptococcaceae in Healthy Gut Flora by Interocin of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess. (ESCMID/ASM Conference on Drug Development to Meet the Challenge of Antimicrobial Resistance)
2018/09	Whole genome analysis of clostridioides difficile strains isolated from horses in Japan. (6th International Clostridium difficile Symposium)
2018/08	The maintenance of antimicrobial resistance genes by multireplicon IncF plasmid F1:A2:B20 in epidemic clone Escherichia coli ST131. (Plasmid Biology 2018)
2018/05	EHEC Working Group Applicability of whole genome sequencing of enterohemorrhagic Escherichia coli O111 in the national surveillance. (VTEC2018 10th International Symposium)
2017/11	Antimicrobial Resistance Genetic Marker Prediction for Mycobacterium tuberculosis. (International Congress of Chemotherapy and Infection 2017 (ICC 2017))
2017/10	Characterization of gut microbiome associated with improvement of ulcerative colitis after antibiotic combination therapy using fecal full metagenomic analysis. (25th United European Gastroenterology Week (UEGW2017))
2017/10	Transcriptional factor ArdK on IncN plasmid contributes to the repression of blaIMP-6 in concealed-type carbapenem-susceptible Escherichia coli. (Keystone Symposia Conference T4: Antimicrobials and Resistance: Opportunities and Challenges)
2017/05	Spreading of the blaCTX-M-8 carrying plasmid in human was mediated by its possessed Escherichia coli contaminated chicken meat; a public health concern. (13th beta-lactamase meeting)
2017/03	Genomic feature of HTLV-1 in Western blot indeterminate. (18th International Conference on Human Retrovirology HTLV and Related Viruses)
2016/12	DGV: Dengue Genographic Viewer. (Joint International Tropical Medicine Meeting 2016 JITMM2016)
2016/10	Application of genome editing technologies for studies on sphingolipid and glycan metabolisms. (EMBO Workshop “Glycosylation in the Golgi complex”)
2016/08	Comparative genome analysis of Staphylococcal Cassette Chromosome (SCC) elements among Staphylococcus saprophyticus, causative agent of uncomplicated urinary tract infections. (17th International Symposium on Staphylococci and Staphylococcal Infections (ISSSI))
2016/07	Visualizing genotype distribution of dengue virus. (The 11th China-Japan International Conference of Virology)
2016/05	Genomic epidemiology of Clostridium botulinum isolates from Japanese Botulism Cases. (9th Meeting on Global Microbial Identifier (GMI))
2016	GenEpid-J: an integrated database of pathogen genomics and epidemiology focused on plasmids involving in the antimicrobial resistance. (Plasmid Biology 2016)
2015/09	Geographical view of dengue genotype distribution. DENGUE SURVEILLANCE: (INFORMATION-SHARING AMONG ASIAN COUNTRIES FOR A BETTER PREPARED REGION)
2015/09	TGS-TB: Total Genotyping Solution for Mycobacterium tuberculosis using short-read whole-genome sequencing. (1st ASM Conference on Rapid NGS Bioinformatic Pipelines for Enhanced Molecular Epidemiologic Investigation of Pathogens)
2015/05	TGS-TB: Total Genotyping Solution for Mycobacterium tuberculosis using short-read whole-genome sequencing. (8th Meeting on Global Microbial Identifier (GMI))
2015/02	Human oral, gut and blood microbiota in patients with Kawasaki disease. (International Kawasaki Disease Symposium 2015)
2014/09	Comparison of genome sequences between Mycobacterium leprae prepared before and after passaging in nude mice footpad. (The Join Meeting The XVIII International Symposium on Gnotobiology (XVIII-ISG) III International Ecologic Forum “Environment and human health” (EcoForum))
2014/09	Isolation and Characterization of A Huh.7.5.1-Derived Cell Clone Highly Permissive to Hepatitis C Virus. (HCV meeting 2014)
2014/07	TMPRSS2 is essential for influenza virus replication in vivo. (International Union of Microbiological Societies (IUMS 2014))
2014/03/25	Makoto Kuroda. Metagenomic analysis for the clinical investigation of possible pathogens. (The 12th Japan-Korea International Symposium on Microbiology (XII-JKISM).)
2011/09	A comprehensive and quantitative 16S ribosomal DNA deep-sequencing analysis for microbiota using next-generation sequencer. (IUMS 2011)
2011/09	Whole-genome analysis of Salmonella enterica serovar Typhimurium T000240 reveals the acquisition of a genomic island involved in multidrug resistance via IS1 derivatives on the chromosome. (IUMS 2011)
2011/05	A Comprehensive And Quantitative 16S rDNA Deep-sequencing Analysis For Microbial Flora Using Next-generation Sequencer. (111th American Society for Microbiology)
2011/05	Characterization of Quasispecies of Pandemic 2009 Influenza A Virus (A/H1N1/2009) by de novo Sequencing using a Next-generation DNA Sequencer. (111th American Society for Microbiology)
2009/08	Discovery of secondary metabolite biosynthetic genes in Nocardia brasiliensis by genome scanning with next generation sequencer. (The 15th International Symposium on the Biology of Actinomycetes (ISBA’15).)
2008/06	Methicillin-Resistant Staphylococcus saprophyticus Carrying Staphylococcal Cassette Chromosome mec (SCCmec) Have Emerged in Urogenital Tract Infections. (108th ASM general meeting.)
2007/09	In vivo expression of cell surface proteins in Staphylococcus aureus. (Gordon Research Conference, staphylococcal diseases.)
2007/09	In vivo expression of cell surface proteins in Staphylococcus aureus. (Gordon Research Conference, staphylococcal diseases.)
2007/05	Sanae Nagasaki and Toshiko Ohta. Sesquiterpene Farnesol Affects Lipase Activity of Staphylococcus aureus as a Competitive Inhibitor. (107th ASM general meeting.)
2007/05	Staphylococcus aureus surface protein SasG contributes to intercellular adhesion and biofilm formation. (107th ASM general meeting.)
2006/09	Sesquiterpene Farnesol Increases the Susceptibility to beta-Lactams due to the Inhibition of Lipid Carrier Synthesis in Methicillin-Resistant Staphylococcus aureus. (46th ICAAC annual meeting.)
2005/06	Complete Genome Sequence of Uropathogenic Bacteria Staphylococcus saprophyticus. (105th ASM general meeting)
2005/06	Evaluation of a cefoxitin 30 µg disc diffusion test for detection of the mecA-positive methicillin-resistant Staphylococcus saprophyticus. (105th ASM general meeting)
2004/08	Genome Structure of Uropathogenic Staphylococcus saprophyticus　Molecular Genetics of Bacteria & Phages, CSHL, 2004 Aug.
2004	Frequent Acquisition of Methicillin-Resistance in Clinical Isolates of Uropathogenic Staphylococcus saprophyticus, and structure of its mecA region. Molecular Genetics of Bacteria and Phages meeting 200 Aug.CSHL